Index

A

ancestor_enrichment() (pandasaurus.query.Query method)

apply_transitive_reduction() (pandasaurus.graph.graph_generator.GraphGenerator static method)

C

chunks() (in module pandasaurus.utils.query_utils) construct_term_list() (pandasaurus.curie_validator.CurieValidator static method)

contextual_slim_enrichment() (pandasaurus.query.Query method) CurieValidator (class in pandasaurus.curie_validator)

E

enriched_df (pandasaurus.query.Query attribute)

F

find_obsolete_term_replacement() (pandasaurus.curie_validator.CurieValidator static method)

find_obsolete_terms() (pandasaurus.curie_validator.CurieValidator static method) full_slim_enrichment() (pandasaurus.query.Query method)

G

generate_enrichment_graph() (pandasaurus.graph.graph_generator.GraphGenerator static method) get_ancestor_enrichment_query() (in module pandasaurus.utils.sparql_queries) get_description() (pandasaurus.resources.slim.Slim method) get_iri() (pandasaurus.resources.term.Term method) get_is_obsoleted() (pandasaurus.resources.term.Term method) get_is_valid() (pandasaurus.resources.term.Term method) get_label() (pandasaurus.resources.term.Term method) get_label_query() (in module pandasaurus.utils.sparql_queries) get_most_specific_objects() (pandasaurus.query.Query method)

get_most_specific_subjects() (pandasaurus.query.Query method) get_name() (pandasaurus.resources.slim.Slim method) get_new_iri() (pandasaurus.resources.term.Term method) get_new_label() (pandasaurus.resources.term.Term method) get_prefixes() (in module pandasaurus.utils.query_utils) get_slim_list() (pandasaurus.slim_manager.SlimManager static method) get_slim_members() (pandasaurus.slim_manager.SlimManager static method) get_term_list() (pandasaurus.resources.slim.Slim method) get_validation_report() (pandasaurus.curie_validator.CurieValidator static method) GraphGenerator (class in pandasaurus.graph.graph_generator)

I

InvalidOntology

InvalidTerm

M

minimal_slim_enrichment() (pandasaurus.query.Query method) mirror_enrichment_for_graph_generation() (pandasaurus.query.Query method) module pandasaurus.utils.pandasaurus_exceptions pandasaurus.utils.query_utils pandasaurus.utils.sparql_queries

O

ObsoletedTerm

P

pandasaurus.utils.pandasaurus_exceptions module pandasaurus.utils.query_utils module

pandasaurus.utils.sparql_queries module parent_enrichment() (pandasaurus.query.Query method)

Q

Query (class in pandasaurus.query)

query() (pandasaurus.query.Query method)

R

run_sparql_query() (in module pandasaurus.utils.query_utils)

S

set_term_list() (pandasaurus.resources.slim.Slim method) simple_enrichment() (pandasaurus.query.Query method)

Slim (class in pandasaurus.resources.slim) SlimManager (class in pandasaurus.slim_manager) synonym_lookup() (pandasaurus.query.Query method)

T

Term (class in pandasaurus.resources.term)

U

update_obsoleted_term() (pandasaurus.resources.term.Term method)

update_obsoleted_terms() (pandasaurus.query.Query method)

V

validate_curie_list() (pandasaurus.curie_validator.CurieValidator static method)

validate_curie_prefixes() (pandasaurus.curie_validator.CurieValidator static method)