Package org.incenp.obofoundry.odk

Class FixRobotReportCommand

java.lang.Object

org.incenp.obofoundry.odk.BasePlugin

org.incenp.obofoundry.odk.FixRobotReportCommand

All Implemented Interfaces:

org.obolibrary.robot.Command

public class FixRobotReportCommand
extends BasePlugin

A command to attempt to automatically fix the trivial issues revealed by the report command.

In the context of this command, “trivial” issues are issues that should not require manual intervention on each affected term. For now, this means the “obsolete missing label” issue and the “lowercase definition” issue.

This requires the report to have been generated with --labels false, so that entities affected by an issue are reported with their ID rather than their label.

Field Summary

Fields inherited from class org.incenp.obofoundry.odk.BasePlugin

ioHelper, options

Fields inherited from interface org.obolibrary.robot.Command

global, missingFileError

Constructor Summary

Constructors

Constructor	Description
FixRobotReportCommand()

Method Summary

Modifier and Type	Method	Description
void	performOperation(org.obolibrary.robot.CommandState state, org.apache.commons.cli.CommandLine line)	Performs whatever operation the command is supposed to do.

Methods inherited from class org.incenp.obofoundry.odk.BasePlugin

execute, getDescription, getIRI, getName, getOptions, getUsage, main

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

FixRobotReportCommand

public FixRobotReportCommand()

Method Details

performOperation

public void performOperation(org.obolibrary.robot.CommandState state,
 org.apache.commons.cli.CommandLine line)
                      throws Exception

Description copied from class: BasePlugin

Performs whatever operation the command is supposed to do.

Specified by:

performOperation in class BasePlugin

Parameters:

state - The internal state of ROBOT.

line - The command line used to invoke the command.

Throws:

Exception - If any error occurs when attempting to execute the operation.