How-To Guides

Warning

many of these guides are in-progress

Contents:

• How to Validate an OBO ontology using Obo Metadata Ontology schema
  • Steps
    • Step 1: Obtain the sqlite version of the ontology
    • Step 2: Install oaklib
    • Step 3: Validate an individual ontology
    • Step 3 (alternative): Validate multiple ontologies
  • Caveats
  • Using your own schema
  • How this works
  • Analysis
• How to write a plugin
  • What is a plugin?
  • An example plugin
  • Creating a plugin
    • Discuss on the issue tracker
    • Create a new project
    • Implement one or more interfaces
    • Implement a selector
    • Write tests
  • Release to PyPI
• FHIR Conversions
  • CLI
  • Config file