oaklib

Contents:

  • Introduction
  • Tutorial
  • The OAK Guide
  • OAK Library Documentation
  • Command Line
  • Datamodels
  • How-To Guides
  • Examples
    • Commands
    • Ontologies
    • Adapter Examples
    • Interfaces Examples
    • Ad Hoc Examples
      • Summarizing with LLMs
      • Analyzing Text Content of all Ontologies
      • Value Set Expansion examples
  • Glossary
  • FAQ
oaklib
  • Examples
  • Ad Hoc Examples
  • View page source

Ad Hoc Examples

  • Summarizing with LLMs
    • Install the LLM command line tool
    • Summarize outputs
    • Templates
    • Gene summaries
  • Analyzing Text Content of all Ontologies
    • Plot Results
  • Value Set Expansion examples
    • VSKit command
    • Example Value Set
    • Configuration
    • Expansion
    • Customizing permissible values
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