Class: Association

A generic association between a thing (subject) and another thing (object).

classDiagram class Association click Association href "../Association" PositiveOrNegativeAssociation <|-- Association click PositiveOrNegativeAssociation href "../PositiveOrNegativeAssociation" Association : aggregator_knowledge_source Association : comments Association : evidence_type Association : negated Association : object Association : object_closure Association : object_closure_label Association : object_label Association : predicate Association : predicate_label Association : primary_knowledge_source Association : property_values Association --> "*" PropertyValue : property_values click PropertyValue href "../PropertyValue" Association : publications Association : subject Association : subject_closure Association : subject_closure_label Association : subject_label Association : supporting_objects

Inheritance

PositiveOrNegativeAssociation
- Association

Slots

Name	Cardinality and Range	Description	Inheritance
subject	0..1 Uriorcurie	The thing which the association is about	PositiveOrNegativeAssociation
predicate	0..1 Uriorcurie	The type of relationship between the subject and object	PositiveOrNegativeAssociation
object	0..1 Uriorcurie	An ontology entity that is associated with the subject	PositiveOrNegativeAssociation
property_values	* PropertyValue	Arbitrary key-value pairs with additional information about the association	PositiveOrNegativeAssociation
subject_label	0..1 String	The label of the thing which the association is about	PositiveOrNegativeAssociation
predicate_label	0..1 String	The label of the type of relationship between the subject and object	PositiveOrNegativeAssociation
object_label	0..1 String	The label of the ontology entity that is associated with the subject	PositiveOrNegativeAssociation
negated	0..1 Boolean	True if the association is negated - i	PositiveOrNegativeAssociation
publications	* Uriorcurie	The publications that support the association	PositiveOrNegativeAssociation
evidence_type	0..1 Uriorcurie	The type of evidence supporting the association	PositiveOrNegativeAssociation
supporting_objects	* Uriorcurie	The objects that support the association	PositiveOrNegativeAssociation
primary_knowledge_source	0..1 Uriorcurie	The primary knowledge source for the association	PositiveOrNegativeAssociation
aggregator_knowledge_source	0..1 Uriorcurie	The knowledge source that aggregated the association	PositiveOrNegativeAssociation
subject_closure	* Uriorcurie	The set of subjects that are related to the subject of the association via th…	PositiveOrNegativeAssociation
subject_closure_label	* String	The set of subjects that are related to the subject of the association via th…	PositiveOrNegativeAssociation
object_closure	* Uriorcurie	The set of objects that are related to the object of the association via the …	PositiveOrNegativeAssociation
object_closure_label	* String	The set of objects that are related to the object of the association via the …	PositiveOrNegativeAssociation
comments	* String	Comments about the association	PositiveOrNegativeAssociation

Usages

used by	used in	type	used
RollupGroup	associations	range	Association
PairwiseCoAssociation	associations_for_subjects_in_common	range	Association

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/oak/association

Mappings

Mapping Type	Mapped Value
self	oa:Annotation
native	ontoassoc:Association

LinkML Source

Direct

```yaml name: Association description: A generic association between a thing (subject) and another thing (object). from_schema: https://w3id.org/oak/association is_a: PositiveOrNegativeAssociation slot_usage: negated: name: negated equals_expression: 'False' class_uri: oa:Annotation

</details>

### Induced

<details>
```yaml
name: Association
description: A generic association between a thing (subject) and another thing (object).
from_schema: https://w3id.org/oak/association
is_a: PositiveOrNegativeAssociation
slot_usage:
  negated:
    name: negated
    equals_expression: 'False'
attributes:
  subject:
    name: subject
    description: The thing which the association is about.
    comments:
    - it is conventional for the subject to be the "entity" and the object to be the
      ontological descriptor
    from_schema: https://w3id.org/oak/association
    exact_mappings:
    - oa:hasBody
    rank: 1000
    slot_uri: rdf:subject
    alias: subject
    owner: Association
    domain_of:
    - PositiveOrNegativeAssociation
    - AssociationChange
    slot_group: core_triple
    range: uriorcurie
  predicate:
    name: predicate
    description: The type of relationship between the subject and object.
    from_schema: https://w3id.org/oak/association
    rank: 1000
    slot_uri: rdf:predicate
    alias: predicate
    owner: Association
    domain_of:
    - PositiveOrNegativeAssociation
    - PropertyValue
    slot_group: core_triple
    range: uriorcurie
  object:
    name: object
    description: An ontology entity that is associated with the subject.
    comments:
    - it is conventional for the subject to be the "entity" and the object to be the
      ontological descriptor
    from_schema: https://w3id.org/oak/association
    exact_mappings:
    - oa:hasTarget
    rank: 1000
    slot_uri: rdf:object
    alias: object
    owner: Association
    domain_of:
    - PositiveOrNegativeAssociation
    - PropertyValue
    slot_group: core_triple
    range: uriorcurie
  property_values:
    name: property_values
    description: Arbitrary key-value pairs with additional information about the association
    from_schema: https://w3id.org/oak/association
    rank: 1000
    alias: property_values
    owner: Association
    domain_of:
    - PositiveOrNegativeAssociation
    range: PropertyValue
    multivalued: true
    inlined: true
  subject_label:
    name: subject_label
    description: The label of the thing which the association is about.
    from_schema: https://w3id.org/oak/association
    rank: 1000
    mixins:
    - denormalized_slot
    slot_uri: sssom:subject_label
    alias: subject_label
    owner: Association
    domain_of:
    - PositiveOrNegativeAssociation
    range: string
  predicate_label:
    name: predicate_label
    description: The label of the type of relationship between the subject and object.
    from_schema: https://w3id.org/oak/association
    rank: 1000
    mixins:
    - denormalized_slot
    slot_uri: sssom:predicate_label
    alias: predicate_label
    owner: Association
    domain_of:
    - PositiveOrNegativeAssociation
    range: string
  object_label:
    name: object_label
    description: The label of the ontology entity that is associated with the subject.
    from_schema: https://w3id.org/oak/association
    rank: 1000
    mixins:
    - denormalized_slot
    slot_uri: sssom:object_label
    alias: object_label
    owner: Association
    domain_of:
    - PositiveOrNegativeAssociation
    range: string
  negated:
    name: negated
    description: True if the association is negated - i.e the core triple is not true.
    from_schema: https://w3id.org/oak/association
    rank: 1000
    alias: negated
    owner: Association
    domain_of:
    - PositiveOrNegativeAssociation
    range: boolean
    equals_expression: 'False'
  publications:
    name: publications
    description: The publications that support the association
    from_schema: https://w3id.org/oak/association
    rank: 1000
    slot_uri: biolink:publications
    alias: publications
    owner: Association
    domain_of:
    - PositiveOrNegativeAssociation
    - AssociationChange
    range: uriorcurie
    multivalued: true
  evidence_type:
    name: evidence_type
    description: The type of evidence supporting the association
    from_schema: https://w3id.org/oak/association
    rank: 1000
    alias: evidence_type
    owner: Association
    domain_of:
    - PositiveOrNegativeAssociation
    range: uriorcurie
  supporting_objects:
    name: supporting_objects
    description: The objects that support the association
    from_schema: https://w3id.org/oak/association
    rank: 1000
    alias: supporting_objects
    owner: Association
    domain_of:
    - PositiveOrNegativeAssociation
    range: uriorcurie
    multivalued: true
  primary_knowledge_source:
    name: primary_knowledge_source
    description: The primary knowledge source for the association
    from_schema: https://w3id.org/oak/association
    rank: 1000
    slot_uri: biolink:primary_knowledge_source
    alias: primary_knowledge_source
    owner: Association
    domain_of:
    - PositiveOrNegativeAssociation
    - ParserConfiguration
    - AssociationChange
    range: uriorcurie
  aggregator_knowledge_source:
    name: aggregator_knowledge_source
    description: The knowledge source that aggregated the association
    from_schema: https://w3id.org/oak/association
    rank: 1000
    slot_uri: biolink:aggregator_knowledge_source
    alias: aggregator_knowledge_source
    owner: Association
    domain_of:
    - PositiveOrNegativeAssociation
    - ParserConfiguration
    - AssociationChange
    range: uriorcurie
  subject_closure:
    name: subject_closure
    description: The set of subjects that are related to the subject of the association
      via the closure predicates
    from_schema: https://w3id.org/oak/association
    rank: 1000
    alias: subject_closure
    owner: Association
    domain_of:
    - PositiveOrNegativeAssociation
    range: uriorcurie
    multivalued: true
  subject_closure_label:
    name: subject_closure_label
    description: The set of subjects that are related to the subject of the association
      via the closure predicates
    from_schema: https://w3id.org/oak/association
    rank: 1000
    alias: subject_closure_label
    owner: Association
    domain_of:
    - PositiveOrNegativeAssociation
    range: string
    multivalued: true
  object_closure:
    name: object_closure
    description: The set of objects that are related to the object of the association
      via the closure predicates
    from_schema: https://w3id.org/oak/association
    rank: 1000
    alias: object_closure
    owner: Association
    domain_of:
    - PositiveOrNegativeAssociation
    range: uriorcurie
    multivalued: true
  object_closure_label:
    name: object_closure_label
    description: The set of objects that are related to the object of the association
      via the closure predicates
    from_schema: https://w3id.org/oak/association
    rank: 1000
    alias: object_closure_label
    owner: Association
    domain_of:
    - PositiveOrNegativeAssociation
    range: string
    multivalued: true
  comments:
    name: comments
    description: Comments about the association
    from_schema: https://w3id.org/oak/association
    rank: 1000
    slot_uri: rdfs:comment
    alias: comments
    owner: Association
    domain_of:
    - PositiveOrNegativeAssociation
    range: string
    multivalued: true
class_uri: oa:Annotation