Class: TaxonConstraint

An individual taxon constraint

classDiagram class TaxonConstraint TaxonConstraint : asserted TaxonConstraint : candidate TaxonConstraint : comments TaxonConstraint : contradicted_by TaxonConstraint --> TaxonConstraint : contradicted_by TaxonConstraint : evolutionary TaxonConstraint : predicate TaxonConstraint --> PredicateTerm : predicate TaxonConstraint : predicates TaxonConstraint --> PredicateTerm : predicates TaxonConstraint : redundant TaxonConstraint : redundant_with TaxonConstraint --> TaxonConstraint : redundant_with TaxonConstraint : redundant_with_only_in TaxonConstraint : sources TaxonConstraint : subject TaxonConstraint --> SubjectTerm : subject TaxonConstraint : taxon TaxonConstraint --> Taxon : taxon TaxonConstraint : via_terms TaxonConstraint --> SubjectTerm : via_terms

Slots

Name	Cardinality and Range	Description	Inheritance
subject	0..1 SubjectTerm	The term to which the constraint applies	direct
predicate	0..1 PredicateTerm	The relationship type for the constraint (e	direct
asserted	0..1 Boolean	holds if the constraint is asserted in the source ontology, rather than infer…	direct
evolutionary	0..1 Boolean	holds if the constraint is an evolutionary statement	direct
redundant	0..1 Boolean	True if this is redundant within the set of constraints of the same type (nev…	direct
redundant_with_only_in	0..1 Boolean	True for never in constraints that are subsumed by an only in	direct
taxon	0..1 Taxon	The taxon which this constraint is about	direct
redundant_with	0..* TaxonConstraint	If the taxon constraint is redundant, then this is the set of taxon constrain…	direct
contradicted_by	0..* TaxonConstraint	If the taxon constraint conflicts with another, then this is the set of taxo…	direct
via_terms	0..* SubjectTerm	For inferred taxon constraints, this is the term or terms that have the taxon…	direct
predicates	0..* PredicateTerm	The predicates that connect the subject term to the via_terms	direct
sources	0..* Uriorcurie		direct
comments	0..* String		direct
candidate	0..1 Boolean	true if this is a proposed candidate constraint	direct

Usages

used by	used in	type	used
SubjectTerm	only_in	range	TaxonConstraint
SubjectTerm	never_in	range	TaxonConstraint
SubjectTerm	present_in	range	TaxonConstraint
SubjectTerm	present_in_ancestor_of	range	TaxonConstraint
TaxonConstraint	redundant_with	range	TaxonConstraint
TaxonConstraint	contradicted_by	range	TaxonConstraint

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/oak/taxon_constraints

Mappings

Mapping Type	Mapped Value
self	rdf:Statement
native	tc:TaxonConstraint

LinkML Source

Direct

```yaml name: TaxonConstraint description: An individual taxon constraint from_schema: https://w3id.org/oak/taxon_constraints attributes: subject: name: subject description: The term to which the constraint applies comments: - this is a reciprocal slot and will be the same as the containing SubjectTerm from_schema: https://w3id.org/oak/taxon_constraints rank: 1000 slot_uri: rdf:subject domain_of: - TaxonConstraint range: SubjectTerm predicate: name: predicate description: The relationship type for the constraint (e.g. in_taxon, never_in taxon) todos: - define a value set of this from_schema: https://w3id.org/oak/taxon_constraints rank: 1000 slot_uri: rdf:predicate domain_of: - TaxonConstraint range: PredicateTerm asserted: name: asserted description: holds if the constraint is asserted in the source ontology, rather than inferred by rules or reasoning from_schema: https://w3id.org/oak/taxon_constraints rank: 1000 domain_of: - TaxonConstraint range: boolean evolutionary: name: evolutionary description: holds if the constraint is an evolutionary statement from_schema: https://w3id.org/oak/taxon_constraints rank: 1000 domain_of: - TaxonConstraint range: boolean redundant: name: redundant description: True if this is redundant within the set of constraints of the same type (never vs only) from_schema: https://w3id.org/oak/taxon_constraints rank: 1000 domain_of: - TaxonConstraint range: boolean redundant_with_only_in: name: redundant_with_only_in description: True for never in constraints that are subsumed by an only in from_schema: https://w3id.org/oak/taxon_constraints rank: 1000 domain_of: - TaxonConstraint range: boolean taxon: name: taxon description: The taxon which this constraint is about. May be species or a more general class. from_schema: https://w3id.org/oak/taxon_constraints rank: 1000 slot_uri: rdf:object domain_of: - TaxonConstraint range: Taxon inlined: true redundant_with: name: redundant_with description: If the taxon constraint is redundant, then this is the set of taxon constraints that it is redundant with from_schema: https://w3id.org/oak/taxon_constraints rank: 1000 multivalued: true domain_of: - TaxonConstraint range: TaxonConstraint contradicted_by: name: contradicted_by description: If the taxon constraint conflicts with another, then this is the set of taxon constraints that it is redundant with from_schema: https://w3id.org/oak/taxon_constraints rank: 1000 multivalued: true domain_of: - TaxonConstraint range: TaxonConstraint via_terms: name: via_terms description: For inferred taxon constraints, this is the term or terms that have the taxon constraint asserted from_schema: https://w3id.org/oak/taxon_constraints rank: 1000 multivalued: true domain_of: - TaxonConstraint range: SubjectTerm inlined: true inlined_as_list: true predicates: name: predicates description: The predicates that connect the subject term to the via_terms. from_schema: https://w3id.org/oak/taxon_constraints rank: 1000 multivalued: true domain_of: - TaxonConstraint range: PredicateTerm sources: name: sources from_schema: https://w3id.org/oak/taxon_constraints rank: 1000 multivalued: true domain_of: - TaxonConstraint range: uriorcurie comments: name: comments from_schema: https://w3id.org/oak/taxon_constraints rank: 1000 multivalued: true domain_of: - TaxonConstraint range: string candidate: name: candidate description: true if this is a proposed candidate constraint from_schema: https://w3id.org/oak/taxon_constraints rank: 1000 domain_of: - TaxonConstraint range: boolean class_uri: rdf:Statement

</details>

### Induced

<details>
```yaml
name: TaxonConstraint
description: An individual taxon constraint
from_schema: https://w3id.org/oak/taxon_constraints
attributes:
  subject:
    name: subject
    description: The term to which the constraint applies
    comments:
    - this is a reciprocal slot and will be the same as the containing SubjectTerm
    from_schema: https://w3id.org/oak/taxon_constraints
    rank: 1000
    slot_uri: rdf:subject
    alias: subject
    owner: TaxonConstraint
    domain_of:
    - TaxonConstraint
    range: SubjectTerm
  predicate:
    name: predicate
    description: The relationship type for the constraint (e.g. in_taxon, never_in
      taxon)
    todos:
    - define a value set of this
    from_schema: https://w3id.org/oak/taxon_constraints
    rank: 1000
    slot_uri: rdf:predicate
    alias: predicate
    owner: TaxonConstraint
    domain_of:
    - TaxonConstraint
    range: PredicateTerm
  asserted:
    name: asserted
    description: holds if the constraint is asserted in the source ontology, rather
      than inferred by rules or reasoning
    from_schema: https://w3id.org/oak/taxon_constraints
    rank: 1000
    alias: asserted
    owner: TaxonConstraint
    domain_of:
    - TaxonConstraint
    range: boolean
  evolutionary:
    name: evolutionary
    description: holds if the constraint is an evolutionary statement
    from_schema: https://w3id.org/oak/taxon_constraints
    rank: 1000
    alias: evolutionary
    owner: TaxonConstraint
    domain_of:
    - TaxonConstraint
    range: boolean
  redundant:
    name: redundant
    description: True if this is redundant within the set of constraints of the same
      type (never vs only)
    from_schema: https://w3id.org/oak/taxon_constraints
    rank: 1000
    alias: redundant
    owner: TaxonConstraint
    domain_of:
    - TaxonConstraint
    range: boolean
  redundant_with_only_in:
    name: redundant_with_only_in
    description: True for never in constraints that are subsumed by an only in
    from_schema: https://w3id.org/oak/taxon_constraints
    rank: 1000
    alias: redundant_with_only_in
    owner: TaxonConstraint
    domain_of:
    - TaxonConstraint
    range: boolean
  taxon:
    name: taxon
    description: The taxon which this constraint is about. May be species or a more
      general class.
    from_schema: https://w3id.org/oak/taxon_constraints
    rank: 1000
    slot_uri: rdf:object
    alias: taxon
    owner: TaxonConstraint
    domain_of:
    - TaxonConstraint
    range: Taxon
    inlined: true
  redundant_with:
    name: redundant_with
    description: If the taxon constraint is redundant, then this is the set of taxon
      constraints that it is redundant with
    from_schema: https://w3id.org/oak/taxon_constraints
    rank: 1000
    multivalued: true
    alias: redundant_with
    owner: TaxonConstraint
    domain_of:
    - TaxonConstraint
    range: TaxonConstraint
  contradicted_by:
    name: contradicted_by
    description: If the taxon constraint conflicts with another,  then this is the
      set of taxon constraints that it is redundant with
    from_schema: https://w3id.org/oak/taxon_constraints
    rank: 1000
    multivalued: true
    alias: contradicted_by
    owner: TaxonConstraint
    domain_of:
    - TaxonConstraint
    range: TaxonConstraint
  via_terms:
    name: via_terms
    description: For inferred taxon constraints, this is the term or terms that have
      the taxon constraint asserted
    from_schema: https://w3id.org/oak/taxon_constraints
    rank: 1000
    multivalued: true
    alias: via_terms
    owner: TaxonConstraint
    domain_of:
    - TaxonConstraint
    range: SubjectTerm
    inlined: true
    inlined_as_list: true
  predicates:
    name: predicates
    description: The predicates that connect the subject term to the via_terms.
    from_schema: https://w3id.org/oak/taxon_constraints
    rank: 1000
    multivalued: true
    alias: predicates
    owner: TaxonConstraint
    domain_of:
    - TaxonConstraint
    range: PredicateTerm
  sources:
    name: sources
    from_schema: https://w3id.org/oak/taxon_constraints
    rank: 1000
    multivalued: true
    alias: sources
    owner: TaxonConstraint
    domain_of:
    - TaxonConstraint
    range: uriorcurie
  comments:
    name: comments
    from_schema: https://w3id.org/oak/taxon_constraints
    rank: 1000
    multivalued: true
    alias: comments
    owner: TaxonConstraint
    domain_of:
    - TaxonConstraint
    range: string
  candidate:
    name: candidate
    description: true if this is a proposed candidate constraint
    from_schema: https://w3id.org/oak/taxon_constraints
    rank: 1000
    alias: candidate
    owner: TaxonConstraint
    domain_of:
    - TaxonConstraint
    range: boolean
class_uri: rdf:Statement