oaklib.utilities.subsets.slimmer_utils

Utilities for working with ontology subsets (slims)

Functions

filter_redundant(oi, curies[, predicates])	Filters a set of nodes to the non-redundant subset.
is_redundant(oi, curie, curies[, predicates])
roll_up_to_named_subset(oi, subset, curies)	Rolls up all specified curies to a named subset, e.g. goslim_generic.
roll_up_to_subset(oi, terms_in_subset, curies)	As roll_up_to_named_subset but with an explicit list of terms to roll up to