LLM Adapter

See also use_llms

Command Line Examples

Use the llm selector, wrapping an existing source

runoak -i llm:sqlite:obo:cl COMMAND [COMMAND-ARGUMENTS-AND-OPTIONS]

Annotation

runoak -i llm:sqlite:obo:hp annotate "abnormalities were found in the eye and the liver"

Validation of Mappings

runoak -i llm:sqlite:obo:go validate-mappings .desc//p=i "molecular_function"

See:

Code