Ontology Access Kit (OAK) Documentation
Contents:
- Introduction
- Tutorial
- The OAK Guide
- Architecture
- Interfaces
- Implementations
- Pronto / OBO Files Implementation
- SQL Database Implementation
- Ontology Lookup Service (OLS) Endpoint
- Simple OBO Implementation
- OBO Graph Implementation
- Bioportal Endpoint
- Sparql Endpoint
- Ubergraph Endpoint
- Ontobee Endpoint
- Ontology Lookup Service (OLS) Endpoint
- Gilda Endpoint
- Aggregator Implementation
- Command Line
- Ontology Implementation Selectors
- Datamodels
- Ontology Metadata Ontology Schema
- search datamodel
- Obographs Datamodel
- SSSOM
- FunOwl
- KGCL
- Semantic Similarity
- Summary Statistics Datamodel
- Taxon Constraints Reporting Datamodel
- Validation Results Datamodel
- Lexical Index
- Mapping Rules Datamodel
- Text Annotator Datamodel
- Cross-Ontology Diff
- OAK Association Data Model
- Converters
- Utilities
- How-To Guides
- Notebooks
- Ontology Concepts
- Glossary
- Frequently Asked Questions